CDS
| Accession Number | TCMCG006C29411 |
| gbkey | CDS |
| Protein Id | XP_022547229.1 |
| Location | join(20167794..20167826,20167944..20168123,20168206..20168283,20168383..20168451,20168545..20168688,20168775..20168891,20168974..20169043,20169114..20169214,20169295..20169325,20169408..20169508,20169585..20169707,20169788..20169889,20169976..20170062) |
| Gene | LOC106361759 |
| GeneID | 106361759 |
| Organism | Brassica napus |
Protein
| Length | 411aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022691508.1 |
| Definition | small RNA degrading nuclease 1-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | small RNA degrading nuclease |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14570
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016592 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGATCATAATCTAGCCACCGCCGAGAAGAATGTGTTGGAAGAATTGGTGAAGCTAGTGCAGCTTCGAGGTCTACGAGGAGAACACGGAGGATGGATTGATTTTTTAGCTGTTTGCAACCAAAAAGCTTCAACACCATCTAACCTTTCCATGGTTTCCCGTGACTTGTTGGTCGCTTTTCTCACAACCTTCAAGAAGAAAGAAGATTTGAAGGCCCTGCAATGTCGTGCTAATAGTCTTCTAGTTGAAAAGTTGAAGCAGGAGACTCCTGAAAATTACACTCCTGAGAAGATGCTTATTCGATTGACCATGAAGCATCCAGAATTCTCGTCAGACTATTCTTTCCCCTCACTCTCCAATGACTGGTTTGTATCCGATATTGGAATGAAGTCGTCGACTGTGATGAAATCAACTGACATGATAGCTGTTGATTGTGAGATGGTTCTTTGTGATGATGGGACTGAGGGTTTGGTCAGAGTCGGCGCTGTCGACCGTCATTTAAAGGTGATTCTTGACAAATATGTGAAACCGGGCAAACCTATTGTTGACTATAGGACAGCCATTACCGGAGTAACTTCACTAGACATCGAAAATGCTACTCTATCTGTGGCAGATATTCAGAGAGAACTTCAGCAATATCTTTCTGATGGTTCTATTTTGGTTGGTCACAGTCTGAATAAAGACATGAGAGTGTTGAAGATAGATCATCCTAAAGTAATTGATACAGCACTTGTGTTCAAATTTTCAAATGCAAGAAATTCAAGAAAACCTTCACTTAATGACCTTCACAAGGCGATTTGTGGTAAGGAAGTCCGAAAGGAAGGTGTTTCTCATAATTGTGTACACGACACTGCAGCTTCAATGAATATTGCACTTGCTTTTATAAAGAAACCATTTGACACAACAGTTACCCCATCAAAGGAGATGCTGGAGGCCGAGAAATCAAGACTCTTTATTCATAGAATCCCTTCCTATGTGCCATCTGAAAAACTGAACATTGTTCTCGCTGGAGAATTTCATTCCACAAAGTTTAAACTTGATGTTAAGCCAGGAAAAACACAAGGAGGTAACTACTGTGCAGTTGTTGTTTTCGATAGTACCAAAGAAGCTGATCAAGCTTTCGAAAACGTTAATGGATACAAAGAGAGGGATTCATTTGGTCTGCCACAAAAACTGTCCACCTTAAAGCTGAGTTCGGGATTAAGTGCAAGTTGTTATGTCCGCAAAATGGTGTAA |
| Protein: MDHNLATAEKNVLEELVKLVQLRGLRGEHGGWIDFLAVCNQKASTPSNLSMVSRDLLVAFLTTFKKKEDLKALQCRANSLLVEKLKQETPENYTPEKMLIRLTMKHPEFSSDYSFPSLSNDWFVSDIGMKSSTVMKSTDMIAVDCEMVLCDDGTEGLVRVGAVDRHLKVILDKYVKPGKPIVDYRTAITGVTSLDIENATLSVADIQRELQQYLSDGSILVGHSLNKDMRVLKIDHPKVIDTALVFKFSNARNSRKPSLNDLHKAICGKEVRKEGVSHNCVHDTAASMNIALAFIKKPFDTTVTPSKEMLEAEKSRLFIHRIPSYVPSEKLNIVLAGEFHSTKFKLDVKPGKTQGGNYCAVVVFDSTKEADQAFENVNGYKERDSFGLPQKLSTLKLSSGLSASCYVRKMV |